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identifier: 1356643
description:
epitope description:E77, D78, P79, A80, D83, L84
antigen name:Capsid protein
host organism:Mus musculus BALB/c
antibody name:3105
aggregation:
instance of dataset
availability:
available
primaryPublications: 12954985
authorizations:
registration not required
accessURL: http://www.iedb.org/reference/1003482
landingPage: http://www.iedb.org/assay/1356643
type:
Literature
publicationVenue:
Proc Natl Acad Sci U S A
dates:
2003
study type: b cell assays
subject species: Hepatitis B virus subtype ayw
fullName:
D M Belnap
N R Watts
J F Conway
N Cheng
S J Stahl
P T Wingfield
A C Steven
method:
electron microscopy
name:
Diversity of core antigen epitopes of hepatitis B virus.
description:
The sequence is from the strain cited in the reference: Conway et al. (1991) J. Mol. Biol. 279: 1111-1121.
The authors deduce that the complete epitope of mAb 3105 is discontinuous, involving residues 77-80 and 83-84 on the immunodominant loop of both subunits that form a spike on the T=4 HBV capsid. Binding of one Fab 3105 at the tip of a spike occludes the other epitope. Cyro-electron microscopy density maps of Fab 3105 bound to reassembled capsids of expressed HBV core domain were placed into high-resolution models of the capsid protein dimer onto which atomic models of Fab molecules were docked to identify the epitope. MAb 3105 was negative in Western blots of HBV capsid protein as predicted for a conformational epitope.

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