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identifier: 1502302
description:
epitope description:VYTFYGMWP
antigen name:Genome polyprotein
host organism:Homo sapiens
aggregation:
instance of dataset
availability:
available
primaryPublications: 18256830
authorizations:
registration not required
accessURL: http://www.iedb.org/reference/1013221
landingPage: http://www.iedb.org/assay/1502302
type:
Literature
publicationVenue:
Cancer Immunol Immunother
dates:
2008
study type: b cell assays
subject species: Hepatitis C virus (isolate 1)
fullName:
Darja Kanduc
Luciana Tessitore
Guglielmo Lucchese
Anthony Kusalik
Emanuel Farber
Francesco M Marincola
method:
ELISA
name:
Sequence uniqueness and sequence variability as modulating factors of human anti-HCV humoral immune response.
description:
This peptide corresponds to the NS2 region of the polyprotein. This peptide has a low similarity level in comparison with the human proteome
only one occurrence of a match for all the possible 5-mers contained in this peptide is found in the human proteome. The peptide is poorly conserved in other HCV subtypes: Two substitutions in subtype 1a (isolate H), five and six substitutions in subtype 2a strain JFH-1 and HC-J6, respectively, four susbtitutions in subtype 1b (strains Taiwan, BK, Con1, Japanese and HC-JT), and six substitutions in subtype 2b (strains HC-J8 and JPUT971017).
Partially purified antibodies from sera of HCV patients who had not yet received therapeutic treatments were analyzed.

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