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identifier: 1812402
description:
epitope description:Y45, L49, A50, R52, G53, A54, P55, G56, A57, Q58, I60, T61, Y62, P63, R64
host organism:Mus musculus
antibody name:Fab
aggregation:
instance of dataset
availability:
available
primaryPublications: 14583193
authorizations:
registration not required
accessURL: http://www.iedb.org/reference/1001555
landingPage: http://www.iedb.org/assay/1812402
type:
Literature
publicationVenue:
J Mol Biol
dates:
2003
study type: b cell assays
subject species: Streptomyces lividans
fullName:
Yufeng Zhou
Roderick MacKinnon
method:
x-ray crystallography
name:
The occupancy of ions in the K+ selectivity filter: charge balance and coupling of ion binding to a protein conformational change underlie high conduction rates.
description:
The epitope residues are calculated from the PDB structure as the antigen residues at 4 Å
distance from the antibody and are as follows: [PDB: 1R3J] Y45, L49, R52, G53, A54, P55, G56, A57, Q58, I60, T61, Y62, R64 [PDB: 1R3K] Y45, L49, R52, G53, A54, P55, G56, A57, Q58, I60, T61, Y62, P63, R64 [PDB: 1R3I] Y45, L49, A50, R52, G53, A54, P55, G56, A57, Q58, I60, T61, Y62, R64 [PDB: 1R3L] Y45, L49, R52, G53, A54, P55, G56, A57, Q58, I60, T61, Y62, R64
The epitope of Fab on the KcsA potassium channel, in the presence of a high concentration of Rb+, was determined from the crystal structure of the complex. The C-terminal 35 amino acids of KcsA were removed by proteolysis.

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